Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAGACTGAAGCTTCAGCTTTAGCTGCAGCTGCC
..(((((((((((..((((((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_184234
GeneSymbolRBM39
Binding site1543,1581
Score0.923
Seed1
Au0.5
Energy-24.7
Binding len19
Me-6.549
Phylopstem4.141378818181817
Phylopflank5.018623893749999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure