Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCACACAGATGGAGGAGGTGTGCCAGA
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_187841
GeneSymbolTRIM54
Binding site875,904
Score1.0
Seed1
Au0.456
Energy-16.4
Binding len11
Me-11.418
Phylopstem-0.10144965555555557
Phylopflank-0.22161698250000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure