Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCACAGAAGGGAATCCAGA
..((((.((((((((((((...&))).)))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_187841
GeneSymbolTRIM54
Binding site202,222
Score0.969
Seed0
Au0.485
Energy-22.9
Binding len20
Me-6.501
Phylopstem0.07898007692307693
Phylopflank-0.024692800000000004
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure