Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCAGGAAGGAGCTC
....((((((((((((..((((&)))).)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194247
GeneSymbolHNRNPA3
Binding site3622,3640
Score0.923
Seed0
Au0.588
Energy-22.6
Binding len18
Me-9.547
Phylopstem-0.2423069766666666
Phylopflank-0.3882434859999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure