Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAACTGCAGCAGAAATGTAGC
((((((((((((((...((((&))))))))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194247
GeneSymbolHNRNPA3
Binding site2368,2392
Score0.923
Seed1
Au0.603
Energy-18.1
Binding len24
Me-4.906
Phylopstem0.6776767578947367
Phylopflank0.43717990249999994
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure