Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGGGACAGCCTGCGGCGGCCGCAGCTGCGC
.(((((((((((((((.((((&.))))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194255
GeneSymbolSLC19A1
Binding site892,926
Score0.846
Seed1
Au0.279
Energy-32.7
Binding len24
Me-3.793
Phylopstem-0.38389478000000005
Phylopflank0.012417320000000006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure