Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATATCAGTGCTTTACTGTCAGCCGCAGCTGTGAC
(((((((((((((((((((((&.)))))))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194272
GeneSymbolRBPMS2
Binding site1870,1906
Score1.0
Seed1
Au0.485
Energy-28.6
Binding len27
Me-3.938
Phylopstem1.7264803960000004
Phylopflank1.4504654549999993
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure