Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGAATGCAGCTT
....((((((.(((.(((((.&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194279
GeneSymbolISCA2
Binding site2228,2244
Score0.923
Seed0
Au0.588
Energy-17.9
Binding len16
Me-13.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure