Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGGGAAGACTCGGAGTGCGATGGCGGCGCAAA
((((.(((((.((((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194281
GeneSymbolINO80C
Binding site63,99
Score0.923
Seed0
Au0.382
Energy-20.8
Binding len18
Me-10.881
Phylopstem1.7484665000000004
Phylopflank2.082080393749999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure