Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTAAAACAACAGCTGGAGG
((.((((((..((((((((((&)))))))...)))..)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194283
GeneSymbolDNAJC21
Binding site1287,1312
Score0.846
Seed0
Au0.574
Energy-21.9
Binding len25
Me-9.562
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure