Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCACAGCCACAGCTGG
...((((((.((((((..(((&)))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194283
GeneSymbolDNAJC21
Binding site5323,5342
Score0.846
Seed0
Au0.397
Energy-21.5
Binding len19
Me-7.757
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure