Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAATCAGCAGCTGTAC
.((((((((((((((......&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194285
GeneSymbolSPTY2D1
Binding site202,218
Score0.923
Seed1
Au0.603
Energy-19.9
Binding len16
Me-4.026
Phylopstem1.33722118
Phylopflank-0.19133682625000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure