Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGAGGCAGCGAG
((((.(((.((((((......&)))))).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194292
GeneSymbolSASS6
Binding site95,111
Score0.846
Seed0
Au0.412
Energy-17.4
Binding len16
Me-9.346
Phylopstem0.13577158666666667
Phylopflank0.37967649225000005
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end2
Position5UTR
2D Structure