Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGTTAGCCAGGTC
(((((((..((..(((((....&))))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_194293
GeneSymbolXIRP1
Binding site2165,2183
Score0.923
Seed1
Au0.368
Energy-19.3
Binding len18
Me-11.944
Phylopstem1.3506688571428571
Phylopflank1.7198600087499996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure