Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGACCACAGCTGCT
..(((((((.((((...(((.&)))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194293
GeneSymbolXIRP1
Binding site93,111
Score0.923
Seed1
Au0.441
Energy-23.7
Binding len18
Me-7.168
Phylopstem0.9716138571428571
Phylopflank1.053411318
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure