Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACTCCGGCAGGGGCCGGG
..(((((((((..(((((((..&))).)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194298
GeneSymbolSLC16A9
Binding site202,221
Score0.846
Seed1
Au0.338
Energy-23.8
Binding len19
Me-9.593
Phylopstem2.324958
Phylopflank2.4829700575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure