Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAATACTCCGGCAGGGGCCGGGGCCGCAGCTGG
...(((((((((((....(((&.)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194298
GeneSymbolSLC16A9
Binding site196,232
Score0.846
Seed0
Au0.309
Energy-25.0
Binding len18
Me-7.483
Phylopstem2.442866636363636
Phylopflank2.2470898950000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure