Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTTAGCGGGGCCAGTGA
((((((((((...((((((...&)))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194315
GeneSymbolUBE2J2
Binding site1496,1514
Score0.923
Seed1
Au0.338
Energy-25.2
Binding len18
Me-11.398
Phylopstem0.752539
Phylopflank0.62098040475
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure