Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCCGACCGCGGGCTGCT
..(((((((((((((...(((&)))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194315
GeneSymbolUBE2J2
Binding site1349,1369
Score0.846
Seed1
Au0.412
Energy-23.7
Binding len20
Me-5.19
Phylopstem0.8580643571428572
Phylopflank0.3578656656250001
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure