Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTGACGGCCGTGGCTCAGG
(((.((((((((((((..(((&)))....))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194315
GeneSymbolUBE2J2
Binding site1506,1529
Score0.923
Seed0
Au0.397
Energy-21.8
Binding len23
Me-6.97
Phylopstem0.51175795
Phylopflank0.7639776058749999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure