Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAG
((.((((((((((((.((((.&.)))).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194322
GeneSymbolOTOF
Binding site5051,5087
Score1.0
Seed0
Au0.324
Energy-28.9
Binding len22
Me-5.728
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure