Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGGGCTCTGGGCGGGAAGGCTAACCTGGTGCGGAGCCAGC
..((((((((...((((((...&.))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194324
GeneSymbolTMSB15B
Binding site4,48
Score0.846
Seed1
Au0.294
Energy-24.2
Binding len19
Me-12.418
Phylopstem2.1191481
Phylopflank0.569634
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure