Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCCTAGGGTTGTCAGTGC
(((((((.((((...(((((((&)))))))..))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194330
GeneSymbolRNF38
Binding site3540,3563
Score0.923
Seed1
Au0.603
Energy-21.9
Binding len23
Me-9.133
Phylopstem4.467023857142857
Phylopflank5.523618209625001
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure