Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTTCCTTTGCTTCAGGCAGCTGTC
..((((((((.(..((((((.&.))))))..)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194330
GeneSymbolRNF38
Binding site2347,2376
Score1.0
Seed1
Au0.544
Energy-21.2
Binding len21
Me-9.928
Phylopstem0.3701145125
Phylopflank1.6174854283749998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure