Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGCAGGGCGGAGCCTCCCCTCGCAGAGTGA
(((((((((((((((((((((.&)))))))).)))..))))))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194332
GeneSymbolRNF38
Binding site387,423
Score0.846
Seed1
Au0.353
Energy-25.6
Binding len36
Me-3.938
Phylopstem0.9436598302857143
Phylopflank1.8560055628749996
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end7
Position5UTR
2D Structure