Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGTGTGATGGTGCCGGGAGGAAGGAAGCGCAGTGA
(((((((((((((((.((((..&.)))).)))..))))).)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194332
GeneSymbolRNF38
Binding site222,260
Score0.846
Seed1
Au0.338
Energy-24.6
Binding len26
Me-4.171
Phylopstem2.9547791578947376
Phylopflank3.642706412875001
Longest consecutive pairings5
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure