Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACGCACAGCAGCAAGCAAT
((((.(((((.(((((((((.&))))))).)).)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194332
GeneSymbolRNF38
Binding site697,720
Score0.846
Seed0
Au0.456
Energy-22.1
Binding len23
Me-10.881
Phylopstem1.2729043999999998
Phylopflank1.251939192625
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure