Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCTTCAGGCAGCTGTC
..((((((((.(..((((((.&))))))..)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194332
GeneSymbolRNF38
Binding site2515,2535
Score1.0
Seed1
Au0.544
Energy-20.8
Binding len20
Me-9.928
Phylopstem1.365553
Phylopflank1.9603592171250002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure