Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCCAAACACAGCAATCACGATCGCCTCTGCAAA
((((((..((((((((((((.&))))................))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194332
GeneSymbolRNF38
Binding site1138,1175
Score0.923
Seed0
Au0.559
Energy-19.7
Binding len37
Me-7.795
Phylopstem2.753532607142856
Phylopflank2.6193088999999996
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure