Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCATCCGAGAGTTGCAT
.(((((((.(((.(((..(((&))).))).)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194356
GeneSymbolSTX2
Binding site766,787
Score0.923
Seed1
Au0.529
Energy-18.6
Binding len21
Me-6.139
Phylopstem0.3706398571428572
Phylopflank0.9136335306250003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure