Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTATTTGCAGTGGAGTCTTGGAGGAGCCAGTA
.((((((((((((..(((((((&)))))))..................)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194358
GeneSymbolRNF41
Binding site420,458
Score0.923
Seed1
Au0.5
Energy-28.7
Binding len38
Me-5.386
Phylopstem-1.186740025
Phylopflank-0.6329250650000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure