Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCTCAGATGGAGCCAGG
..((((((((..(((((((((.&))))))..))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194358
GeneSymbolRNF41
Binding site3270,3291
Score0.846
Seed1
Au0.471
Energy-26.2
Binding len21
Me-11.129
Phylopstem0.6244905090909091
Phylopflank0.76731337
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure