Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCAGACCAGAGTCAGTTGTAT
.((((((((((((((((((((&)))))))..))))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194358
GeneSymbolRNF41
Binding site537,564
Score0.846
Seed1
Au0.485
Energy-20.8
Binding len27
Me-3.793
Phylopstem-0.4706223346153846
Phylopflank-0.42991632999999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure