Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGCTGTATAGCTGGGT
.(.(((((((((((.(((((.&))))).))))))..))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194358
GeneSymbolRNF41
Binding site2795,2817
Score0.846
Seed0
Au0.529
Energy-21.0
Binding len22
Me-6.086
Phylopstem2.979235076923077
Phylopflank4.1323663562499995
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure