Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTATTTGCAGTGGAGTCTTGGAGGAGCCAGTA
.((((((((((((..(((((((&)))))))..................)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194359
GeneSymbolRNF41
Binding site324,362
Score0.923
Seed1
Au0.5
Energy-28.7
Binding len38
Me-5.386
Phylopstem0.4216084725
Phylopflank0.43062742712499985
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure