Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGAGGCAGAGCTTGCAGTGA
(((((((((((((((((((...&))))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194359
GeneSymbolRNF41
Binding site3873,3898
Score0.846
Seed1
Au0.397
Energy-25.4
Binding len25
Me-3.938
Phylopstem0.5530370541666666
Phylopflank0.3211330849999999
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure