Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGATCAACCTCAACTGCAT
.(((((.((.(((((..((((&))))....))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194434
GeneSymbolVAPA
Binding site873,896
Score0.846
Seed0
Au0.559
Energy-20.1
Binding len23
Me-6.813
Phylopstem-0.21902689279999996
Phylopflank0.03435065555000001
Longest consecutive pairings5
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure