Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACTGCCATTGCTGTAT
.((((((...(((.(((((((&))))))).)))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194434
GeneSymbolVAPA
Binding site2632,2653
Score0.846
Seed1
Au0.574
Energy-19.7
Binding len21
Me-9.263
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure