Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACCAACTGCGGGCACGTGTACTGCGAC
(((((((((((((((..((((&))))...))))))))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194439
GeneSymbolRNF212
Binding site161,193
Score0.808
Seed1
Au0.441
Energy-21.1
Binding len32
Me-4.171
Phylopstem-0.1576501041666667
Phylopflank-0.17815035250000005
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure