Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTCACTATGTTGGCCAGGA
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_194441
GeneSymbolBTN3A1
Binding site3350,3372
Score0.923
Seed1
Au0.544
Energy-18.0
Binding len16
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure