Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCTTCTGTGGGCTGTGAT
((((((((((((..(.(((((&))))).)..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194441
GeneSymbolBTN3A1
Binding site93,116
Score0.846
Seed1
Au0.559
Energy-18.8
Binding len23
Me-6.317
Phylopstem-0.14567036153846152
Phylopflank0.09854537749999998
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure