Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGGCATCAACACAGCCTCTTCTGCAGAGACAGCCTGGAGCTGTT
..((((((.(((((((.....&.)))))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194448
GeneSymbolCLEC4A
Binding site314,362
Score0.846
Seed1
Au0.515
Energy-19.4
Binding len17
Me-6.013
Phylopstem0.06241260000000001
Phylopflank0.08993514125000006
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure