Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCAGACGCTGCAGCTGCAGC
((((((((((((((((..(((&))).)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194449
GeneSymbolPHLPP1
Binding site684,708
Score0.923
Seed1
Au0.309
Energy-26.7
Binding len24
Me-3.938
Phylopstem-1.8962847947368424
Phylopflank0.04709400625000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure