Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGGTGGAGCTGGC
..(((((((((((((((((...&))))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194457
GeneSymbolUBE2J2
Binding site1258,1277
Score0.923
Seed1
Au0.235
Energy-26.4
Binding len19
Me-4.957
Phylopstem0.2786684205555556
Phylopflank-0.013826478125000041
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure