Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTTAGCGGGGCCAGTGA
((((((((((...((((((...&)))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_194457
GeneSymbolUBE2J2
Binding site1317,1335
Score0.923
Seed1
Au0.338
Energy-25.2
Binding len18
Me-11.398
Phylopstem0.10724475
Phylopflank0.04121643287500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure