Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCCGACCGCGGGCTGCT
..(((((((((((((...(((&)))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194457
GeneSymbolUBE2J2
Binding site1170,1190
Score0.923
Seed1
Au0.412
Energy-23.7
Binding len20
Me-5.19
Phylopstem0.30593755714285714
Phylopflank-0.13893630412500002
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure