Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTGACGGCCGTGGCTCAGG
(((.((((((((((((..(((&)))....))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194457
GeneSymbolUBE2J2
Binding site1327,1350
Score0.846
Seed0
Au0.397
Energy-21.8
Binding len23
Me-6.97
Phylopstem-0.38088171666666665
Phylopflank0.144507529625
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure