Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTGACGGCCGTGGCTCAGG
(((.((((((((((((..(((&)))....))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_194458
GeneSymbolUBE2J2
Binding site1587,1610
Score1.0
Seed0
Au0.397
Energy-21.8
Binding len23
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure