Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTTCCCGTGTGGCTGGCCGAGGACGACCTCGGCTGCAT
.((((((((.((((((..(((&.)))....)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_197939
GeneSymbolRNF135
Binding site59,100
Score0.846
Seed1
Au0.294
Energy-26.8
Binding len24
Me-5.036
Phylopstem-0.432814475
Phylopflank-0.028759942499999927
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure