Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCCGCGTCTCTGAAGAGCAGAGAGGAAGATGGAAACCGAGTCCGGG
..(((((((((((((((((((.&))))))................)))))))).............).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_197970
GeneSymbolBOLL
Binding site171,221
Score0.846
Seed1
Au0.485
Energy-19.8
Binding len50
Me-4.957
Phylopstem2.1020963469387755
Phylopflank1.8197812
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end7
Position5UTR
2D Structure